Linnaeus Bundalian

About Me

I am a Phd Student at Leipzig University in Germany working on Obesity Mechanisms. As a Phd student I am trying to understand the systemic and genetic cause of fat accumulation in obese people. I am using lipoma - a benign tumor as a model for the fat accumulation. I am mostly using different bioinformatic tools to discover things about obesity which includes but not limited to the genes differentially expressed and regulated for patients as well as genes having selection associated to accumulation of fats. I was a recepient of a Foreign Graduate Scholarship during my M.Eng in France specializing in Biomedical Engineering. I did my internship in INSERM - a national health research institute in France where I tried to model the mRNA-miRNA interaction and relationship in cancer. I worked as a Manufacturing Engineer (Test Product Engineer) in Continetal Temic Electronics Philippines. I also worked as a freelance software developer - mainly making desktop,web and IoT based softwares. Currently, I am exploring the field of Bioinformatics and Computational Biology for NGS and Transcriptomics

  • Residence Germany
  • Address 015 Alber-Schweitzer Str. 04317
  • Email linnaeusbundalian@gmail.com
  • Phone +33 64 800 3816

What I Do

Bioinformatics

I do magic!I create pipelines for bioinformatic analysis and analyse genomic and transcriptomic data

Software Development

I code for food! I create software solutions on different platform and framework - for general purpose application, IoT, commerce, analytics and even for cars

Statistical and Data Modelling

I use different statistical and ML approaches to solve problems and gain insights

Professional Fees

Bioinformatics
$22 per hour
Pipeline Development
NGS and Transcriptomic Analysis
Software Development
$30 per hour
Web Development (Python, C#)
Desktop Application Development
Internet of Things
Data analytics
$15 per hour
Statistical Modelling
Machine Learning Projects

Resume

Education

2021-Present
University of Leipzig, Germany

Phd | Dr. Nat. Rer

Bioinformatics

2022-Present
Universitat Rovira i Virgili, Spain (online)

MSc

Biomedical Data Science

2019-2021
Ecole Centrale de Lille, France

MEng

Biomedical Engineering

2009-2014
Lyceum of the Philippines University, Philippines

BSc

Computer Engineering

Experience

Aug 2021 - Present
Universitatklinkum Leipzig

Research fellow

Build bioinformatic pipeline for upstream and downstream analyses. Analyze genomic data and its association to biological processes and phenotypes

June 2023 - Present
Consulting

Data Scientist

Create machine learning and deep learning models for image and scene analysis e.g Neural Image Assessment use case. Build algorithm to estimate similarities in graph network. Implement methods to provide statistical rigor on implemented solutions.

Jan 2022 - Apr 2024
SpaceCrop Technologies Kft.

Software Consultant

Analyze user requirements. Translate user requirements to software requirements and specification. Manage the tasks and activities to meet the deliverables. Manage and prepare the sprints and monitor the project’s progress. Define metrics to quantify project progress.

Jan 2021 - Dec 2021
SpaceCrop Technologies Kft.

Backend Developer

Aids in creating the backend services and creating a predictive model for soil moisture requirement of farms in Hungary.

June 2020 - Aug 2021
VCG Global

Backend Developer

Created the RESTful APIs bridging the Web user interface to the backend services, records and database.

Dec 2017 - Sept 2019
RCaldo Consultancy

Software Developer

Aids in creating the backend services for web application and IoT systems.

June 2014 - Oct 2020
Continetal Temic Electronics Philippines

Test Engineer

Monitor machine performance which includes but not limited to First Pass Yield (FPY), Overall efficiency (OEE) and Process Capability. Develop and maintain test programs for machines and products. Train people in operating machines and performing failure analysis. Perform analysis on test data and failed parts

Nov 2013 - Oct 2020
Freelace

Software Developer

Created software applications running on top of different platforms (desktop, web, IoT/MCU)

Data Science and analytics Skills

Statistical Modelling

80%

Machine Learning

90%

SQL

95%

Coding Skills

Python, R, C#, Bash

95%

MVC, Restful APIs, Design Patterns

95%

Excel VBA

95%

Others

  • Project Management
  • Communication
  • Problem-Solving
  • Flexibility
  • Critical Thinking

Certificates

Bioinformatics Specialization

Credential ID: X28ESGBDC8PL
Aug 2022

Data Science

Credential ID: ZDKXSFVD8EJY
Jan 2021

Data Science: Statistics and Machine Learning

Credential ID: 2F2Z7DJMP47T
Jan 2021

Drug Development Product Management

Credential ID: 4QSRUPEXVLVD
Jan 2021

Genomic Data Science

Credential ID: J5P36K7LA5UP
Dec 2020

Portfolio

Experiment

Experiment.Core

Correlation

COR.RNA

Yeoh

Tissue Modelling

MC

Monte Carlo Simulation

Orthosis

Finger Orthosis

Foot

Hybrid Foot Prosthesis

PPG

Photoplethysmography

Fuzzy

Pain Assessment

Bionic

Bionic Hand

Baby

Baby Head

Baby

RNA Pipeline

Blog